Package: dynpred 0.1.2

dynpred: Companion Package to "Dynamic Prediction in Clinical Survival Analysis"

The dynpred package contains functions for dynamic prediction in survival analysis.

Authors:Hein Putter

# Install 'dynpred' in R:

install.packages('dynpred', repos = c('https://hputter.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

ALL - Data from the European Society for Blood and Marrow Transplantation
nki - Clinical and follow-up data of breast cancer patients as collected in the Dutch Cancer Institute (NKI) in Amsterdam
ova - Data originate from two clinical trials on the use of different combination chemotherapies, carried out in The Netherlands around 1980
wbc1 - Data from the Benelux CML study
wbc2 - Data from the Benelux CML study

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

Last updated 9 years agofrom:8cb061ebbb. Checks:OK: 1 NOTE: 8. Indexed: yes.

Help page	Topics
The companion package of the book "Dynamic Prediction in Survival Analysis"	dynpred-package dynpred
Calculate AUC(t) curve	AUC
Calculate dynamic AUC(t) curve	AUCw
Calculate Harrell's c-index	cindex
Create landmark data set	cutLM
Calculate cross-validated c-index	CVcindex
Calculate cross-validated log-partial likelihood (with shrinkage)	CVPL
Debugging function	deb
Data from the European Society for Blood and Marrow Transplantation (EBMT)	ALL EBMT data
Evaluate step function at a set of new time points	evalstep
Calculate dynamic "death within window" curve	Fwindow
Clinical and follow-up data of breast cancer patients as collected in the Dutch Cancer Institute (NKI) in Amsterdam	nki NKI breast cancer clinical data
Data originate from two clinical trials on the use of different combination chemotherapies, carried out in The Netherlands around 1980	ova Ovarian cancer data
Calculate prediction error curve	pe pecox
Calculate dynamic prediction error curve	pew pewcox
Create scatter plot with imputed survival times	scatterplot
Create a tolerance plot	toleranceplot
Data from the Benelux CML study	WBC follow-up data wbc1
Data from the Benelux CML study	WBC measurements data wbc2